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BioTuring Team

The Why, When and How of 3D PCA

Principle Component Analysis is commonly presented in 2D scatter plot but 3D PCA is more effective in some cases. Learn more in this story

6 min readOct 15, 2020

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The Why, When and How of 3D PCA

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BioTuring Team

6 best box and whisker plot makers

A box and whisker plot, or just box plot, is a graph that visualizes how spread-out a dataset is. A box plot displays 5 values: minimum…

6 min readSep 27, 2020

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6 best box and whisker plot makers

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BioTuring Team

Immunoglobulin genes up-regulated in lung adenocarcinoma infiltrating T cells: A report from…

Highlights:

6 min readSep 8, 2020

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Immunoglobulin genes up-regulated in lung adenocarcinoma infiltrating T cells: A report from…

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BioTuring Team

Single-cell analysis of CD8+ T cells in immune checkpoint blockade: some reproducible insights…

Cancer treatment, as challenging as it sounds, has been revolutionized by recent advances in immune checkpoint blockade (ICB) therapies…

7 min readMar 30, 2020

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Single-cell analysis of CD8+ T cells in immune checkpoint blockade: some reproducible insights…

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BioTuring Team

A review of Haining Lab’s work: Loss of ADAR1 in tumors overcomes resistance to immune checkpoint…

Ever questioned why the immune system does not attack our own double-stranded RNA? Speaking of this, we should not ignore the role of ADAR…

6 min readJan 4, 2019

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A review of Haining Lab’s work: Loss of ADAR1 in tumors overcomes resistance to immune checkpoint…

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BioTuring Team

BioTuring Browser: the software to resolve major challenges in single-cell RNA-seq data analysis —…

Single-cell RNA-seq technologies have opened up a completely new era for transcriptomic studies. For the first time ever, scientists can…

2 min readDec 5, 2018

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BioTuring Browser: the software to resolve major challenges in single-cell RNA-seq data analysis —…

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BioTuring Team

Dos and don’ts for a heatmap color scale

Heatmaps. We see them all over the scientific journals — the shading matrices that convey meaningful stories. Wanna interpret gene…

4 min readSep 24, 2018

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Dos and don’ts for a heatmap color scale

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BioTuring Team

How to read PCA biplots and scree plots

Principal component analysis (PCA) has been gaining popularity as a tool to bring out strong patterns from complex biological datasets. We…

5 min readJun 18, 2018

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How to read PCA biplots and scree plots

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BioTuring Team

Principal component analysis explained simply

As we are entering the era of Big Data, everyone and their moms seem to be talking about PCA. All the papers you read mention PCA (with…

7 min readJun 14, 2018

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Principal component analysis explained simply

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BioTuring Team

How to compare box plots

Box plots, a.k.a. box-and-whiskers plots, are an excellent way to visualize differences among groups. They manage to carry a lot of…

3 min readMay 22, 2018

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How to compare box plots

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BioTuring Team

BioTuring Team

At BioTuring, we dream, we think, we code, and we deliver important algorithms and software — to tackle biomedical challenges.

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